FERRARI, FRANCESCO
FERRARI, FRANCESCO
Istituto di Genetica Molecolare "Luigi Luca Cavalli Sforza"
CHD8 suppression impacts on histone H3 lysine 36 trimethylation and alters RNA alternative splicing
2022-01-01 Kerschbamer E; Arnoldi M; Tripathi T; Pellegrini M; Maturi S; Erdin S; Salviato E; Di Leva F; Sebestyén E; Dassi E; Zarantonello G; Benelli M; Campos E; Basson MA; Gusella JF; Gustincich S; Piazza S; Demichelis F; Talkowski ME; Ferrari F; Biagioli M
Comparison of computational methods for Hi-C data analysis
2017-01-01 Forcato, M; Nicoletti, C; Pal, K; Livi, Cm; Ferrari, F; Bicciato, S
Computational Biology Solutions to Identify Enhancers-target Gene Pairs
2019-01-01 Hariprakash, Jm; Ferrari, F
Dysfunctional polycomb transcriptional repression contributes to Lamin A/C dependent muscular dystrophy
2020-01-01 Bianchi, A; Mozzetta, C; Pegoli, G; Lucini, F; Valsoni, S; Rosti, V; Petrini, C; Cortesi, A; Gregoretti, F; Antonelli, L; Oliva, G; De Bardi, M; Rizzi, R; Bodega, B; Pasini, D; Ferrari, F; Bearzi, C; Lanzuolo, C
Global chromatin conformation differences in the Drosophila dosage compensated chromosome X
2019-01-01 Pal, K; Forcato, M; Jost, D; Sexton, T; Vaillant, C; Salviato, E; Mazza, Emc; Lugli, E; Cavalli, G; Ferrari, F
Hi-C analysis: from data generation to integration
2019-01-01 Pal K.; Forcato M.; Ferrari F.
HiCBricks: building blocks for efficient handling of large Hi-C datasets.
2020-01-01 Pal, K; Tagliaferri, I; Livi, Cm; Ferrari, F
Leveraging three-dimensional chromatin architecture for effective reconstruction of enhancer-target gene regulatory interactions
2021-01-01 Salviato, E; Djordjilovic, V; Hariprakash, Jm; Tagliaferri, I; Pal, K; Ferrari, F
Oncolytic adenovirus and gene therapy with EphA2-BiTE for the treatment of pediatric high-grade gliomas
2021-01-01 Arnone, Cm; Polito, Va; Mastronuzzi, A; Carai, A; Diomedi, Fc; Antonucci, L; Petrilli, Ll; Vinci, M; Ferrari, F; Salviato, E; Scarsella, M; De Stefanis, C; Weber, G; Quintarelli, C; De Angelis, B; Brenner, Mk; Gottschalk, S; Hoyos, V; Locatelli, F; Caruana, I; Del Bufalo, F
SAMMY-seq reveals early alteration of heterochromatin and deregulation of bivalent genes in Hutchinson-Gilford Progeria Syndrome
2020-01-01 Sebestyen E; Marullo F; Lucini F; Petrini C; Bianchi A; Valsoni S; Olivieri I; Antonelli L; Gregoretti F; Oliva G; Ferrari F; Lanzuolo C.
Single-cell profiling reveals the dynamics of cytomegalovirusspecific T-cells in haploidentical hematopoietic stem cell transplantation
2021-01-01 Van Beek, Jjp; Puccio, S; Roberto, A; De Paoli, F; Graziano, G; Salviato, E; Alvisi, G; Zanon, V; Scarpa, A; Zaghi, E; Calvi, M; Di Vito, C; Mineri, R; Sarina, B; De Philippis, C; Santoro, A; Mariotti, J; Bramanti, S; Ferrari, F; Castagna, L; Mavilio, D; Lugli, E
T-Cells Expressing Receptor Recombination/Revision Machinery Are Detected in the Tumor Microenvironment and Expanded in Genomically Over-unstable Models
2021-01-01 Gaia Morello; Valeria Cancila; Massimo La Rosa; Giovanni Germano; Daniele Lecis; Vito Amodio; Federica Zanardi; Fabio Iannelli; Daniele Greco; Laura La Paglia; Antonino Fiannaca; Alfonso Urso; Giulia Graziano; Francesco Ferrari; Serenella M. Pupa; Sabina Sangaletti; Claudia Chiodoni; Giancarlo Pruneri; Alberto Bardelli; Mario P. Colombo; Claudio Tripodo
The role of atmospheric aerosols on severe convective precipitation in a Mediterranean coastal region
2024-01-01 Ferrari, Francesco; Rizza, Umberto; Morichetti, Mauro; Cassola, Federico; Miglietta, Mario; Mazzino, Andrea
Tissue fluidification promotes a cGAS-STING cytosolic DNA response in invasive breast cancer
2023-01-01 Frittoli E; Palamidessi A; Iannelli F; Zanardi F; Villa S; Barzaghi L; Abdo H; Cancila V; Beznoussenko GV; Della Chiara G; Pagani M; Malinverno C; Bhattacharya D; Pisati F; Yu W; Galimberti V; Bonizzi G; Martini E; Mironov AA; Gioia U; Ascione F; Li Q; Havas K; Magni S; Lavagnino Z; Pennacchio FA; Maiuri P; Caponi S; Mattarelli M; Martino S; d'Adda di Fagagna F; Rossi C; Lucioni M; Tancredi R; Pedrazzoli P; Vecchione A; Petrini C; Ferrari F; Lanzuolo C; Bertalot G; Nader G; Foiani M; Piel M; Cerbino R; Giavazzi F; Tripodo C; Scita G
Visualizing and Annotating Hi-C Data
2021-01-01 Pal, K; Ferrari, F
WoPPER: Web server for Position Related data analysis of gene Expression in Prokaryotes.
2017-01-01 Puccio, Simone; Grillo, Giorgio; Licciulli, Flavio; Severgnini, Marco; Liuni, Sabino; Bicciato, Silvio; DE BELLIS, Gianluca; Ferrari, Francesco; Peano, Clelia
| Titolo | Data di pubblicazione | Autore(i) | File |
|---|---|---|---|
| CHD8 suppression impacts on histone H3 lysine 36 trimethylation and alters RNA alternative splicing | 1-gen-2022 | Kerschbamer E; Arnoldi M; Tripathi T; Pellegrini M; Maturi S; Erdin S; Salviato E; Di Leva F; Sebestyén E; Dassi E; Zarantonello G; Benelli M; Campos E; Basson MA; Gusella JF; Gustincich S; Piazza S; Demichelis F; Talkowski ME; Ferrari F; Biagioli M | |
| Comparison of computational methods for Hi-C data analysis | 1-gen-2017 | Forcato, M; Nicoletti, C; Pal, K; Livi, Cm; Ferrari, F; Bicciato, S | |
| Computational Biology Solutions to Identify Enhancers-target Gene Pairs | 1-gen-2019 | Hariprakash, Jm; Ferrari, F | |
| Dysfunctional polycomb transcriptional repression contributes to Lamin A/C dependent muscular dystrophy | 1-gen-2020 | Bianchi, A; Mozzetta, C; Pegoli, G; Lucini, F; Valsoni, S; Rosti, V; Petrini, C; Cortesi, A; Gregoretti, F; Antonelli, L; Oliva, G; De Bardi, M; Rizzi, R; Bodega, B; Pasini, D; Ferrari, F; Bearzi, C; Lanzuolo, C | |
| Global chromatin conformation differences in the Drosophila dosage compensated chromosome X | 1-gen-2019 | Pal, K; Forcato, M; Jost, D; Sexton, T; Vaillant, C; Salviato, E; Mazza, Emc; Lugli, E; Cavalli, G; Ferrari, F | |
| Hi-C analysis: from data generation to integration | 1-gen-2019 | Pal K.; Forcato M.; Ferrari F. | |
| HiCBricks: building blocks for efficient handling of large Hi-C datasets. | 1-gen-2020 | Pal, K; Tagliaferri, I; Livi, Cm; Ferrari, F | |
| Leveraging three-dimensional chromatin architecture for effective reconstruction of enhancer-target gene regulatory interactions | 1-gen-2021 | Salviato, E; Djordjilovic, V; Hariprakash, Jm; Tagliaferri, I; Pal, K; Ferrari, F | |
| Oncolytic adenovirus and gene therapy with EphA2-BiTE for the treatment of pediatric high-grade gliomas | 1-gen-2021 | Arnone, Cm; Polito, Va; Mastronuzzi, A; Carai, A; Diomedi, Fc; Antonucci, L; Petrilli, Ll; Vinci, M; Ferrari, F; Salviato, E; Scarsella, M; De Stefanis, C; Weber, G; Quintarelli, C; De Angelis, B; Brenner, Mk; Gottschalk, S; Hoyos, V; Locatelli, F; Caruana, I; Del Bufalo, F | |
| SAMMY-seq reveals early alteration of heterochromatin and deregulation of bivalent genes in Hutchinson-Gilford Progeria Syndrome | 1-gen-2020 | Sebestyen E; Marullo F; Lucini F; Petrini C; Bianchi A; Valsoni S; Olivieri I; Antonelli L; Gregoretti F; Oliva G; Ferrari F; Lanzuolo C. | |
| Single-cell profiling reveals the dynamics of cytomegalovirusspecific T-cells in haploidentical hematopoietic stem cell transplantation | 1-gen-2021 | Van Beek, Jjp; Puccio, S; Roberto, A; De Paoli, F; Graziano, G; Salviato, E; Alvisi, G; Zanon, V; Scarpa, A; Zaghi, E; Calvi, M; Di Vito, C; Mineri, R; Sarina, B; De Philippis, C; Santoro, A; Mariotti, J; Bramanti, S; Ferrari, F; Castagna, L; Mavilio, D; Lugli, E | |
| T-Cells Expressing Receptor Recombination/Revision Machinery Are Detected in the Tumor Microenvironment and Expanded in Genomically Over-unstable Models | 1-gen-2021 | Gaia Morello; Valeria Cancila; Massimo La Rosa; Giovanni Germano; Daniele Lecis; Vito Amodio; Federica Zanardi; Fabio Iannelli; Daniele Greco; Laura La Paglia; Antonino Fiannaca; Alfonso Urso; Giulia Graziano; Francesco Ferrari; Serenella M. Pupa; Sabina Sangaletti; Claudia Chiodoni; Giancarlo Pruneri; Alberto Bardelli; Mario P. Colombo; Claudio Tripodo | |
| The role of atmospheric aerosols on severe convective precipitation in a Mediterranean coastal region | 1-gen-2024 | Ferrari, Francesco; Rizza, Umberto; Morichetti, Mauro; Cassola, Federico; Miglietta, Mario; Mazzino, Andrea | |
| Tissue fluidification promotes a cGAS-STING cytosolic DNA response in invasive breast cancer | 1-gen-2023 | Frittoli E; Palamidessi A; Iannelli F; Zanardi F; Villa S; Barzaghi L; Abdo H; Cancila V; Beznoussenko GV; Della Chiara G; Pagani M; Malinverno C; Bhattacharya D; Pisati F; Yu W; Galimberti V; Bonizzi G; Martini E; Mironov AA; Gioia U; Ascione F; Li Q; Havas K; Magni S; Lavagnino Z; Pennacchio FA; Maiuri P; Caponi S; Mattarelli M; Martino S; d'Adda di Fagagna F; Rossi C; Lucioni M; Tancredi R; Pedrazzoli P; Vecchione A; Petrini C; Ferrari F; Lanzuolo C; Bertalot G; Nader G; Foiani M; Piel M; Cerbino R; Giavazzi F; Tripodo C; Scita G | |
| Visualizing and Annotating Hi-C Data | 1-gen-2021 | Pal, K; Ferrari, F | |
| WoPPER: Web server for Position Related data analysis of gene Expression in Prokaryotes. | 1-gen-2017 | Puccio, Simone; Grillo, Giorgio; Licciulli, Flavio; Severgnini, Marco; Liuni, Sabino; Bicciato, Silvio; DE BELLIS, Gianluca; Ferrari, Francesco; Peano, Clelia |