FIANNACA, ANTONINO
FIANNACA, ANTONINO
Istituto di Calcolo e Reti ad Alte Prestazioni - ICAR - Sede Secondaria Palermo
GOWDL: gene ontology-driven wide and deep learning model for cell typing of scRNA-seq data
2023 Fiannaca, A; LA ROSA, Massimo; LA PAGLIA, Laura; Gaglio, S; Urso, A
Transcriptomic and Bioinformatic Analyses Identifying a Central Mif-Cop9-Nf-kB Signaling Network in Innate Immunity Response of Ciona robusta
2023 LA PAGLIA, Laura; Vazzana, Mirella; Mauro, Manuela; Dumas, Francesca; Fiannaca, Antonino; Urso, Alfonso; Arizza, Vincenzo; Vizzini, Aiti
A Graph Neural Network Approach for the Analysis of siRNA-Target Biological Networks
2022 LA ROSA, Massimo; Fiannaca, Antonino; LA PAGLIA, Laura; Urso, Alfonso
Direct RNA Nanopore Sequencing of SARS-CoV-2 Extracted from Critical Material from Swabs
2022 Vacca, Davide; Fiannaca, Antonino; Tramuto, Fabio; Cancila, Valeria; LA PAGLIA, Laura; Mazzucco, Walter; Gulino, Alessandro; LA ROSA, Massimo; Massimo Maida, Carmelo; Morello, Gaia; Belmonte, Beatrice; Casuccio, Alessandra; Maugeri, Rosario; Iacopino, Gerardo; Rita Balistreri, Carmela; Vitale, Francesco; Tripodo, Claudio; Urso, Alfonso
Impact of the flame retardant 2,2'4,4'-tetrabromodiphenyl ether (PBDE-47) in THP-1 macrophage-like cell function via small extracellular vesicles
2022 Longo, Valeria; Aloi, Noemi; LO PRESTI, Elena; Fiannaca, Antonino; Longo, Alessandra; Adamo, Giorgia; Urso, Alfonso; Meraviglia, Serena; Bongiovanni, Antonella; Cibella, Fabio; Colombo, Paolo
2,2'4,4'-Tetrabromodiphenyl Ether (PBDE-47) Modulates the Intracellular miRNA Profile, sEV Biogenesis and Their miRNA Cargo Exacerbating the LPS-Induced Pro-Inflammatory Response in THP-1 Macrophages
2021 Longo, Valeria; Longo, Alessandra; Adamo, Giorgia; Fiannaca, Antonino; Picciotto, Sabrina; LA PAGLIA, Laura; Romancino, Daniele; LA ROSA, Massimo; Urso, Alfonso; Cibella, Fabio; Bongiovanni, Antonella; Colombo, Paolo
ceRNA Network Regulation of TGF-B, WNT, FOXO, Hedgehog Pathways in the Pharynx of Ciona robusta
2021 Vizzini, Aiti; Bonura, Angela; LA PAGLIA, Laura; Fiannaca, Antonino; LA ROSA, Massimo; Urso, Alfonso; Arizza, Vincenzo
T-Cells Expressing Receptor Recombination/Revision Machinery Are Detected in the Tumor Microenvironment and Expanded in Genomically Over-unstable Models
2021 Morello, Gaia; Cancila, Valeria; LA ROSA, Massimo; Germano, Giovanni; Lecis, Daniele; Amodio, Vito; Zanardi, Federica; Iannelli, Fabio; Greco, Daniele; LA PAGLIA, Laura; Fiannaca, Antonino; Urso, Alfonso; Graziano, Giulia; Ferrari, Francesco; M Pupa, Serenella; Sangaletti, Sabina; Chiodoni, Claudia; Pruneri, Giancarlo; Bardelli, Alberto; P Colombo, Mario; Tripodo, Claudio
Transcriptomic Analyses Reveal 2 and 4 Family Members of Cytochromes P450 (CYP) Involved in LPS Inflammatory Response in Pharynx of Ciona robusta
2021 Vizzini, Aiti; Bonura, Angela; LA PAGLIA, Laura; Fiannaca, Antonino; LA ROSA, Massimo; Urso, Alfonso; Mauro, Manuela; Vazzana, Mirella; Arizza, Vincenzo
BITS2019: the sixteenth annual meeting of the Italian society of bioinformatics
2020 Urso, Alfonso; Fiannaca, Antonino; LA ROSA, Massimo; LA PAGLIA, Laura; Lo Bosco, Giosue'; Rizzo, Riccardo
miRTissue_ce: extending miRTissue web service with the analysis of ceRNA-ceRNA interactions
2020 Antonino Fiannaca; Laura La Paglia; Massimo La Rosa; Riccardo Rizzo; Alfonso Urso
MiRNA therapeutics based on logic circuits of biological pathways
2019 V. Boscaino; A. Fiannaca; L. La Paglia; M. La Rosa; R. Rizzo; A. Urso
The 2017 Network Tools and Applications in Biology (NETTAB) workshop: aims, topics and outcomes
2019 P. Romano; A. Céol; A. Drager; A. Fiannaca; R. Giugno; M. La Rosa; L. Milanesi; U. Pfeffer; R. Rizzo; S.Y. Shin; J. Xia; A. Urso
BioGraph: a web application and a graph database for querying and analyzing bioinformatics resources
2018 Messina, A; Fiannaca, A; LA PAGLIA, Laura; LA ROSA, Massimo; Urso, A
Deep learning models for bacteria taxonomic classification of metagenomic data
2018 A. Fiannaca; L. La Paglia; M. La Rosa; G. Lo Bosco; G. Renda, R. Rizzo; S. Gaglio; A. Urso
miRTissue: a web application for the analysis of miRNA-target interactions in human tissues
2018 Fiannaca, A; LA ROSA, Massimo; LA PAGLIA, Laura; Urso, A
NRC: Non-coding RNA Classifier based on structural features
2017 Fiannaca, A; La Rosa, M; La Paglia, L; Rizzo, R; Urso, A
MiRNATIP: a SOM-based miRNA-target interactions predictor
2016 Fiannaca, Antonino; LA ROSA, Massimo; LA PAGLIA, Laura; Rizzo, Riccardo; Urso, Alfonso
A k-mer-based barcode DNA classification methodology based on spectral representation and a neural gas network
2015 Fiannaca, Antonino; La Rosa, Massimo; Rizzo, Riccardo; Urso, Alfonso
Analysis of miRNA expression profiles in breast cancer using biclustering
2015 Fiannaca, Antonino; LA ROSA, Massimo; LA PAGLIA, Laura; Rizzo, Riccardo; Urso, Alfonso
| Titolo | Data di pubblicazione | Autore(i) | File |
|---|---|---|---|
| GOWDL: gene ontology-driven wide and deep learning model for cell typing of scRNA-seq data | 1-gen-2023 | Fiannaca, A; LA ROSA, Massimo; LA PAGLIA, Laura; Gaglio, S; Urso, A | |
| Transcriptomic and Bioinformatic Analyses Identifying a Central Mif-Cop9-Nf-kB Signaling Network in Innate Immunity Response of Ciona robusta | 1-gen-2023 | LA PAGLIA, Laura; Vazzana, Mirella; Mauro, Manuela; Dumas, Francesca; Fiannaca, Antonino; Urso, Alfonso; Arizza, Vincenzo; Vizzini, Aiti | |
| A Graph Neural Network Approach for the Analysis of siRNA-Target Biological Networks | 1-gen-2022 | LA ROSA, Massimo; Fiannaca, Antonino; LA PAGLIA, Laura; Urso, Alfonso | |
| Direct RNA Nanopore Sequencing of SARS-CoV-2 Extracted from Critical Material from Swabs | 1-gen-2022 | Vacca, Davide; Fiannaca, Antonino; Tramuto, Fabio; Cancila, Valeria; LA PAGLIA, Laura; Mazzucco, Walter; Gulino, Alessandro; LA ROSA, Massimo; Massimo Maida, Carmelo; Morello, Gaia; Belmonte, Beatrice; Casuccio, Alessandra; Maugeri, Rosario; Iacopino, Gerardo; Rita Balistreri, Carmela; Vitale, Francesco; Tripodo, Claudio; Urso, Alfonso | |
| Impact of the flame retardant 2,2'4,4'-tetrabromodiphenyl ether (PBDE-47) in THP-1 macrophage-like cell function via small extracellular vesicles | 1-gen-2022 | Longo, Valeria; Aloi, Noemi; LO PRESTI, Elena; Fiannaca, Antonino; Longo, Alessandra; Adamo, Giorgia; Urso, Alfonso; Meraviglia, Serena; Bongiovanni, Antonella; Cibella, Fabio; Colombo, Paolo | |
| 2,2'4,4'-Tetrabromodiphenyl Ether (PBDE-47) Modulates the Intracellular miRNA Profile, sEV Biogenesis and Their miRNA Cargo Exacerbating the LPS-Induced Pro-Inflammatory Response in THP-1 Macrophages | 1-gen-2021 | Longo, Valeria; Longo, Alessandra; Adamo, Giorgia; Fiannaca, Antonino; Picciotto, Sabrina; LA PAGLIA, Laura; Romancino, Daniele; LA ROSA, Massimo; Urso, Alfonso; Cibella, Fabio; Bongiovanni, Antonella; Colombo, Paolo | |
| ceRNA Network Regulation of TGF-B, WNT, FOXO, Hedgehog Pathways in the Pharynx of Ciona robusta | 1-gen-2021 | Vizzini, Aiti; Bonura, Angela; LA PAGLIA, Laura; Fiannaca, Antonino; LA ROSA, Massimo; Urso, Alfonso; Arizza, Vincenzo | |
| T-Cells Expressing Receptor Recombination/Revision Machinery Are Detected in the Tumor Microenvironment and Expanded in Genomically Over-unstable Models | 1-gen-2021 | Morello, Gaia; Cancila, Valeria; LA ROSA, Massimo; Germano, Giovanni; Lecis, Daniele; Amodio, Vito; Zanardi, Federica; Iannelli, Fabio; Greco, Daniele; LA PAGLIA, Laura; Fiannaca, Antonino; Urso, Alfonso; Graziano, Giulia; Ferrari, Francesco; M Pupa, Serenella; Sangaletti, Sabina; Chiodoni, Claudia; Pruneri, Giancarlo; Bardelli, Alberto; P Colombo, Mario; Tripodo, Claudio | |
| Transcriptomic Analyses Reveal 2 and 4 Family Members of Cytochromes P450 (CYP) Involved in LPS Inflammatory Response in Pharynx of Ciona robusta | 1-gen-2021 | Vizzini, Aiti; Bonura, Angela; LA PAGLIA, Laura; Fiannaca, Antonino; LA ROSA, Massimo; Urso, Alfonso; Mauro, Manuela; Vazzana, Mirella; Arizza, Vincenzo | |
| BITS2019: the sixteenth annual meeting of the Italian society of bioinformatics | 1-gen-2020 | Urso, Alfonso; Fiannaca, Antonino; LA ROSA, Massimo; LA PAGLIA, Laura; Lo Bosco, Giosue'; Rizzo, Riccardo | |
| miRTissue_ce: extending miRTissue web service with the analysis of ceRNA-ceRNA interactions | 1-gen-2020 | Antonino Fiannaca; Laura La Paglia; Massimo La Rosa; Riccardo Rizzo; Alfonso Urso | |
| MiRNA therapeutics based on logic circuits of biological pathways | 1-gen-2019 | V. Boscaino; A. Fiannaca; L. La Paglia; M. La Rosa; R. Rizzo; A. Urso | |
| The 2017 Network Tools and Applications in Biology (NETTAB) workshop: aims, topics and outcomes | 1-gen-2019 | P. Romano; A. Céol; A. Drager; A. Fiannaca; R. Giugno; M. La Rosa; L. Milanesi; U. Pfeffer; R. Rizzo; S.Y. Shin; J. Xia; A. Urso | |
| BioGraph: a web application and a graph database for querying and analyzing bioinformatics resources | 1-gen-2018 | Messina, A; Fiannaca, A; LA PAGLIA, Laura; LA ROSA, Massimo; Urso, A | |
| Deep learning models for bacteria taxonomic classification of metagenomic data | 1-gen-2018 | A. Fiannaca; L. La Paglia; M. La Rosa; G. Lo Bosco; G. Renda, R. Rizzo; S. Gaglio; A. Urso | |
| miRTissue: a web application for the analysis of miRNA-target interactions in human tissues | 1-gen-2018 | Fiannaca, A; LA ROSA, Massimo; LA PAGLIA, Laura; Urso, A | |
| NRC: Non-coding RNA Classifier based on structural features | 1-gen-2017 | Fiannaca, A; La Rosa, M; La Paglia, L; Rizzo, R; Urso, A | |
| MiRNATIP: a SOM-based miRNA-target interactions predictor | 1-gen-2016 | Fiannaca, Antonino; LA ROSA, Massimo; LA PAGLIA, Laura; Rizzo, Riccardo; Urso, Alfonso | |
| A k-mer-based barcode DNA classification methodology based on spectral representation and a neural gas network | 1-gen-2015 | Fiannaca, Antonino; La Rosa, Massimo; Rizzo, Riccardo; Urso, Alfonso | |
| Analysis of miRNA expression profiles in breast cancer using biclustering | 1-gen-2015 | Fiannaca, Antonino; LA ROSA, Massimo; LA PAGLIA, Laura; Rizzo, Riccardo; Urso, Alfonso |