COLONNA, VINCENZA
COLONNA, VINCENZA
UO Servizio Ente
A comprehensive analysis of SARS-CoV-2 missense mutations indicates that all possible amino acid replacements in the viral proteins occurred within the first two-and-a-half years of the pandemic
2024 Balasco, Nicole; Damaggio, Gianluca; Esposito, Luciana; Colonna, Vincenza; Vitagliano, Luigi
Building pangenome graphs
2024 Garrison, E.; Guarracino, A.; Heumos, S.; Villani, F.; Bao, Z.; Tattini, L.; Hagmann, J.; Vorbrugg, S.; Marco-Sola, S.; Kubica, C.; Ashbrook, D. G.; Thorell, K.; Rusholme-Pilcher, R. L.; Liti, G.; Rudbeck, E.; Golicz, A. A.; Nahnsen, S.; Yang, Z.; Mwaniki, M. N.; Nobrega, F. L.; Wu, Y.; Chen, H.; de Ligt, J.; Sudmant, P. H.; Huang, S.; Weigel, D.; Soranzo, N.; Colonna, V.; Williams, R. W.; Prins, P.
Effect of Cholesterol-Lowering Variants in ANGPTL3 and APOB Genes on Liver Disease
2024 Di Costanzo, A.; Pirona, I.; Buonaiuto, S.; D'Erasmo, L.; Bini, S.; Tramontano, D.; Covino, S.; Maiorca, C.; Minicocci, I.; Sponziello, M.; Baratta, F.; Commodari, D.; Colonna, V.; Via, A.; Arca, M.
Three-dimensional environment sensitizes pancreatic cancer cells to the anti-proliferative effect of budesonide by reprogramming energy metabolism
2024 Ibello, Eduardo; Saracino, Federica; Delle Cave, Donatella; Buonaiuto, Silvia; Amoroso, Filomena; Andolfi, Gennaro; Corona, Marco; Guardiola, Ombretta; Colonna, Vincenza; Sainz Jr, Bruno; Altucci, Lucia; De Cesare, Dario; Cobellis, Gilda; Lonardo, Enza; Patriarca, Eduardo Jorge; D'Aniello, Cristina; Minchiotti, Gabriella
A draft human pangenome reference
2023 Liao, Ww; Asri, M; Ebler, J; Doerr, D; Haukness, M; Hickey, G; Lu, S; Lucas, Jk; Monlong, J; Abel, Hj; Buonaiuto, S; Chang, Xh; Cheng, H; Chu, J; Colonna, V; Eizenga, Jm; Feng, X; Fischer, C; Fulton, Rs; Garg, S; Groza, C; Guarracino, A; Harvey, Wt; Heumos, S; Howe, K; Jain, M; Lu, Ty; Markello, C; Martin, Fj; Mitchell, Mw; Munson, Km; Mwaniki, Mn; Novak, Am; Olsen, He; Pesout, T; Porubsky, D; Prins, P; Sibbesen, Ja; Siren, J; Tomlinson, C; Villani, F; Vollger, Mr; Antonaccifulton, Ll; Baid, G; Baker, Ca; Belyaeva, A; Billis, K; Carroll, A; Chang, Pc; Cody, S; Cook, De; Cookdeegan, Rm; Cornejo, Oe; Diekhans, M; Ebert, P; Fairley, S; Fedrigo, O; Felsenfeld, Al; Formenti, G; Frankish, A; Gao, Y; Garrison, Na; Giron, Cg; Green, Re; Haggerty, L; Hoekzema, K; Hourlier, T; Ji, Hp; Kenny, Ee; Koenig, Ba; Kolesnikov, A; Korbel, Jo; Kordosky, J; Koren, S; Lee, Hj; Lewis, Ap; Magalhaes, H; Marcosola, S; Marijon, P; Mccartney, A; Mcdaniel, J; Mountcastle, J; Nattestad, M; Nurk, S; Olson, Nd; Popejoy, Ab; Puiu, D; Rautiainen, M; Regier, Aa; Rhie, A; Sacco, S; Sanders, Ad; Schneider, Va; Schultz, Bi; Shafin, K; Smith, Mw; Sofia, Hj; Abou Tayoun, An; Thibaudnissen, F; Tricomi, Ff; Wagner, J; Walenz, B; Wood, Jmd; Zimin, Av; Bourque, G; Chaisson, Mjp; Flicek, P; Phillippy, Am; Zook, Jm; Eichler, Ee; Haussler, D; Wang, T; Jarvis, Ed; Miga, Kh; Garrison, E; Marschall, T; Hall, Im; Li, H; Paten, B
A novel quantitative trait locus implicates Msh3 in the propensity for genome-wide short tandem repeat expansions in mice
2023 O Maksimov, Mikhail; Wu, Cynthia; G Ashbrook, David; Villani, Flavia; Colonna, Vincenza; Mousavi, Nima; Ma, Nichole; Lu, Lu; K Pritchard, Jonathan; Goren, Alon; W Williams, Robert; A Palmer, Abraham; Gymrek, Melissa
Increased mutation and gene conversion within human segmental duplications
2023 Vollger, Mr; Dishuck, Pc; Harvey, Wt; Dewitt, Ws; Guitart, X; Goldberg, Me; Rozanski, An; Lucas, J; Asri, M; Abel, Hj; Antonaccifulton, Ll; Baid, G; Baker, Ca; Belyaeva, A; Billis, K; Bourque, G; Buonaiuto, S; Carroll, A; Chaisson, Mjp; Chang, Pc; Chang, Xh; Cheng, H; Chu, J; Cody, S; Colonna, V; Cook, De; Cookdeegan, Rm; Cornejo, Oe; Diekhans, M; Doerr, D; Ebert, P; Ebler, J; Eizenga, Jm; Fairley, S; Fedrigo, O; Felsenfeld, Al; Feng, X; Fischer, C; Flicek, P; Formenti, G; Frankish, A; Fulton, Rs; Gao, Y; Garg, S; Garrison, E; Garrison, Na; Giron, Cg; Green, Re; Groza, C; Guarracino, A; Haggerty, L; Hall, Im; Haukness, M; Haussler, D; Heumos, S; Hickey, G; Hourlier, T; Howe, K; Jain, M; Jarvis, Ed; Ji, Hp; Kenny, Ee; Koenig, Ba; Kolesnikov, A; Korbel, Jo; Kordosky, J; Koren, S; Lee, Hj; Li, H; Liao, Ww; Lu, S; Lu, Ty; Lucas, Jk; Magalhaes, H; Marcosola, S; Marijon, P; Markello, C; Marschall, T; Martin, Fj; Mccartney, A; Mcdaniel, J; Miga, Kh; Mitchell, Mw; Monlong, J; Mountcastle, J; Mwaniki, Mn; Nattestad, M; Novak, Am; Nurk, S; Olsen, He; Olson, Nd; Paten, B; Pesout, T; Phillippy, Am; Popejoy, Ab; Prins, P; Puiu, D; Rautiainen, M; Regier, Aa; Rhie, A; Sacco, S; Sanders, Ad; Schneider, Va; Schultz, Bi; Shafin, K; Sibbesen, Ja; Siren, J; Smith, Mw; Sofia, Hj; Abou Tayoun, An; Thibaudnissen, F; Tomlinson, C; Tricomi, Ff; Villani, F; Vollger, Mr; Wagner, J; Walenz, B; Wang, T; Wood, Jmd; Zimin, Av; Zook, Jm; Munson, Km; Lewis, Ap; Hoekzema, K; Logsdon, Ga; Porubsky, D; Paten, B; Harris, K; Hsieh, Ph; Eichler, Ee
Pangenome graph construction from genome alignments with Minigraph-Cactus
2023 Hickey, G; Monlong, J; Ebler, J; Novak, Am; Eizenga, Jm; Gao, Y; Abel, Hj; Antonaccifulton, Ll; Asri, M; Baid, G; Baker, Ca; Belyaeva, A; Billis, K; Bourque, G; Buonaiuto, S; Carroll, A; Chaisson, Mjp; Chang, Pc; Chang, Xh; Cheng, H; Chu, J; Cody, S; Colonna, V; Cook, De; Cookdeegan, Rm; Cornejo, Oe; Diekhans, M; Doerr, D; Ebert, P; Ebler, J; Eichler, Ee; Fairley, S; Fedrigo, O; Felsenfeld, Al; Feng, X; Fischer, C; Flicek, P; Formenti, G; Frankish, A; Fulton, Rs; Garg, S; Garrison, E; Garrison, Na; Giron, Cg; Green, Re; Groza, C; Guarracino, A; Haggerty, L; Hall, Im; Harvey, Wt; Haukness, M; Haussler, D; Heumos, S; Hoekzema, K; Hourlier, T; Howe, K; Jain, M; Jarvis, Ed; Ji, Hp; Kenny, Ee; Koenig, Ba; Kolesnikov, A; Korbel, Jo; Kordosky, J; Koren, S; Lee, Hj; Lewis, Ap; Liao, Ww; Lu, S; Lu, Ty; Lucas, Jk; Magalhaes, H; Marcosola, S; Marijon, P; Markello, C; Marschall, T; Martin, Fj; Mccartney, A; Mcdaniel, J; Miga, Kh; Mitchell, Mw; Mountcastle, J; Munson, Km; Mwaniki, Mn; Nattestad, M; Nurk, S; Olsen, He; Olson, Nd; Pesout, T; Phillippy, Am; Popejoy, Ab; Porubsky, D; Prins, P; Puiu, D; Rautiainen, M; Regier, Aa; Rhie, A; Sacco, S; Sanders, Ad; Schneider, Va; Schultz, Bi; Shafin, K; Sibbesen, Ja; Siren, J; Smith, Mw; Sofia, Hj; Tayoun, Ana; Thibaudnissen, F; Tomlinson, C; Tricomi, Ff; Villani, F; Vollger, Mr; Wagner, J; Walenz, B; Wang, T; Wood, Jmd; Zimin, Av; Zook, Jm; Marschall, T; Li, H; Paten, B
Recombination between heterologous human acrocentric chromosomes
2023 Guarracino, A; Buonaiuto, S; de Lima, Lg; Potapova, T; Rhie, A; Koren, S; Rubinstein, B; Fischer, C; Abel, Hj; Antonaccifulton, Ll; Asri, M; Baid, G; Baker, Ca; Belyaeva, A; Billis, K; Bourque, G; Carroll, A; Chaisson, Mjp; Chang, Pc; Chang, Xh; Cheng, H; Chu, J; Cody, S; Cook, De; Cookdeegan, Rm; Cornejo, Oe; Diekhans, M; Doerr, D; Ebert, P; Ebler, J; Eichler, Ee; Eizenga, Jm; Fairley, S; Fedrigo, O; Felsenfeld, Al; Feng, X; Flicek, P; Formenti, G; Frankish, A; Fulton, Rs; Gao, Y; Garg, S; Garrison, Na; Giron, Cg; Green, Re; Groza, C; Haggerty, L; Hall, I; Harvey, Wt; Haukness, M; Haussler, D; Heumos, S; Hickey, G; Hoekzema, K; Hourlier, T; Howe, K; Jain, M; Jarvis, Ed; Ji, Hp; Kenny, Ee; Koenig, Ba; Kolesnikov, A; Korbel, Jo; Kordosky, J; Lee, Hj; Lewis, Ap; Li, H; Liao, Ww; Lu, S; Lu, Ty; Lucas, Jk; Magalhaes, H; Marcosola, S; Marijon, P; Markello, C; Marschall, T; Martin, Fj; Mccartney, A; Mcdaniel, J; Miga, Kh; Mitchell, Mw; Monlong, J; Mountcastle, J; Munson, Km; Mwaniki, Mn; Nattestad, M; Novak, Am; Nurk, S; Olsen, He; Olson, Nd; Paten, B; Pesout, T; Popejoy, Ab; Porubsky, D; Prins, P; Puiu, D; Rautiainen, M; Regier, Aa; Sacco, S; Sanders, Ad; Schneider, Va; Schultz, Bi; Shafin, K; Sibbesen, Ja; Siren, J; Smith, Mw; Sofia, Hj; Tayoun, Ana; Thibaudnissen, F; Tomlinson, C; Tricomi, Ff; Villani, F; Vollger, Mr; Wagner, J; Walenz, B; Wang, T; Wood, Jmd; Zimin, Av; Zook, Jm; Gerton, Jl; Phillippy, Am; Colonna, V; Garrison, E
LAMC2 marks a tumor-initiating cell population with an aggressive signature in pancreatic cancer
2022 DELLE CAVE, Donatella; Buonaiuto, Silvia; Sainz Jr, Bruno; Fantuz, Marco; Mangini, Maria; Carrer, Alessandro; Di Domenico, Annalisa; Teresa Iavazzo, Tea; Andolfi, Gennaro; Cortina, Carme; Sevillano, Marta; Heeschen, Christopher; Colonna, Vincenza; Corona, Marco; Cucciardi, Antonio; Di Guida, Martina; Batlle, Eduard; DE LUCA, ANNA CHIARA; Lonardo, Enza
Prioritization of putatively detrimental variants in euploid miscarriages
2022 Buonaiuto, Silvia; Di Biase, Immacolata; Aleotti, Valentina; Ravaei, Amin; De Marino, Adriano; Damaggio, Gianluca; Chierici, Marco; Pulijala, Madhuri; D'Ambrosio, Palmira; Esposito, Gabriella; Ayub, Qasim; Furlanello, Cesare; Greco, Pantaleo; Capalbo, Antonio; Rubini, Michele; Di Biase, Sebastiano; Colonna, Vincenza
A global analysis of conservative and non-conservative mutations in SARS-CoV-2 detected in the first year of the COVID-19 world-wide diffusion
2021 Balasco, Nicole; Damaggio, Gianluca; Esposito, Luciana; Villani, Flavia; Berisio, Rita; Colonna, Vincenza; Vitagliano, Luigi
Efficient dynamic variation graphs
2021 M Eizenga, Jordan; M Novak, Adam; Kobayashi, Emily; Villani, Flavia; Cisar, Cecilia; Heumos, Simon; Hickey, Glenn; Colonna, Vincenza; Paten, Benedict; Garrison, Erik
Genetic instability and anti-HPV immune response as drivers of infertility associated with HPV infection
2021 Isaguliants M.; Krasnyak S.; Smirnova O.; Colonna V.; Apolikhin O.; Buonaguro F.M.
Efficient dynamic variation graphs
2020 Eizenga, Jm; Novak, Am; Kobayashi, E; Villani, F; Cisar, C; Heumos, S; Hickey, G; Colonna, V; Paten, B; Garrison, E
Maternal exome analysis for the diagnosis of oocyte maturation defects and early embryonic developmental arrest
2020 Capalbo, A; Buonaiuto, S; Figliuzzi, M; Damaggio, G; Girardi, L; Caroselli, S; Polim, ; Patassini, C; Cetinkaya, M; Yuksel, B; Azad, A; Grøndahl, Ml; Hoffmann, Er; Simónc, ; Colonna, V; Kahraman, S
Genomic diversity and novel genome-wide association with fruit morphology in Capsicum, from 746k polymorphic sites
2019 Colonna, Vincenza; D'Agostino, Nunzio; Garrison, Erik; Albrechtsen, Anders; Meisner, Jonas; Facchiano, Angelo; Cardi, Teodoro; Tripodi, Pasquale
Identification of sex determination genes and their evolution in Phlebotominae sand flies (Diptera, Nematocera)
2019 Petrella, V; Aceto, S; Colonna, V; Saccone, G; Sanges, R; Polanska, N; Volf, P; Gradoni, L; Bongiorno, G; Salvemini, M
Inter-individual genomic heterogeneity within European population isolates
2019 Anagnostou, P; Dominici, V; Battaggia, C; Lisi, A; Sarno, S; Boattini, A; Calo, C; Francalacci, P; Vona, G; Tofanelli, S; Vilar, Mg; Colonna, V; Pagani, L; Bisol, Gd
Positive selection in Europeans and East-Asians at the ABCA12 gene
2019 Sirica, R; Buonaiuto, M; Petrella, V; Sticco, L; Tramontano, D; Antonini, D; Missero, C; Guardiola, O; Andolfi, G; Kumar, H; Ayub, Q; Xue, Y; Tylersmith, C; Salvemini, M; D'Angelo, G; Colonna, V
| Titolo | Data di pubblicazione | Autore(i) | File |
|---|---|---|---|
| A comprehensive analysis of SARS-CoV-2 missense mutations indicates that all possible amino acid replacements in the viral proteins occurred within the first two-and-a-half years of the pandemic | 1-gen-2024 | Balasco, Nicole; Damaggio, Gianluca; Esposito, Luciana; Colonna, Vincenza; Vitagliano, Luigi | |
| Building pangenome graphs | 1-gen-2024 | Garrison, E.; Guarracino, A.; Heumos, S.; Villani, F.; Bao, Z.; Tattini, L.; Hagmann, J.; Vorbrugg, S.; Marco-Sola, S.; Kubica, C.; Ashbrook, D. G.; Thorell, K.; Rusholme-Pilcher, R. L.; Liti, G.; Rudbeck, E.; Golicz, A. A.; Nahnsen, S.; Yang, Z.; Mwaniki, M. N.; Nobrega, F. L.; Wu, Y.; Chen, H.; de Ligt, J.; Sudmant, P. H.; Huang, S.; Weigel, D.; Soranzo, N.; Colonna, V.; Williams, R. W.; Prins, P. | |
| Effect of Cholesterol-Lowering Variants in ANGPTL3 and APOB Genes on Liver Disease | 1-gen-2024 | Di Costanzo, A.; Pirona, I.; Buonaiuto, S.; D'Erasmo, L.; Bini, S.; Tramontano, D.; Covino, S.; Maiorca, C.; Minicocci, I.; Sponziello, M.; Baratta, F.; Commodari, D.; Colonna, V.; Via, A.; Arca, M. | |
| Three-dimensional environment sensitizes pancreatic cancer cells to the anti-proliferative effect of budesonide by reprogramming energy metabolism | 1-gen-2024 | Ibello, Eduardo; Saracino, Federica; Delle Cave, Donatella; Buonaiuto, Silvia; Amoroso, Filomena; Andolfi, Gennaro; Corona, Marco; Guardiola, Ombretta; Colonna, Vincenza; Sainz Jr, Bruno; Altucci, Lucia; De Cesare, Dario; Cobellis, Gilda; Lonardo, Enza; Patriarca, Eduardo Jorge; D'Aniello, Cristina; Minchiotti, Gabriella | |
| A draft human pangenome reference | 1-gen-2023 | Liao, Ww; Asri, M; Ebler, J; Doerr, D; Haukness, M; Hickey, G; Lu, S; Lucas, Jk; Monlong, J; Abel, Hj; Buonaiuto, S; Chang, Xh; Cheng, H; Chu, J; Colonna, V; Eizenga, Jm; Feng, X; Fischer, C; Fulton, Rs; Garg, S; Groza, C; Guarracino, A; Harvey, Wt; Heumos, S; Howe, K; Jain, M; Lu, Ty; Markello, C; Martin, Fj; Mitchell, Mw; Munson, Km; Mwaniki, Mn; Novak, Am; Olsen, He; Pesout, T; Porubsky, D; Prins, P; Sibbesen, Ja; Siren, J; Tomlinson, C; Villani, F; Vollger, Mr; Antonaccifulton, Ll; Baid, G; Baker, Ca; Belyaeva, A; Billis, K; Carroll, A; Chang, Pc; Cody, S; Cook, De; Cookdeegan, Rm; Cornejo, Oe; Diekhans, M; Ebert, P; Fairley, S; Fedrigo, O; Felsenfeld, Al; Formenti, G; Frankish, A; Gao, Y; Garrison, Na; Giron, Cg; Green, Re; Haggerty, L; Hoekzema, K; Hourlier, T; Ji, Hp; Kenny, Ee; Koenig, Ba; Kolesnikov, A; Korbel, Jo; Kordosky, J; Koren, S; Lee, Hj; Lewis, Ap; Magalhaes, H; Marcosola, S; Marijon, P; Mccartney, A; Mcdaniel, J; Mountcastle, J; Nattestad, M; Nurk, S; Olson, Nd; Popejoy, Ab; Puiu, D; Rautiainen, M; Regier, Aa; Rhie, A; Sacco, S; Sanders, Ad; Schneider, Va; Schultz, Bi; Shafin, K; Smith, Mw; Sofia, Hj; Abou Tayoun, An; Thibaudnissen, F; Tricomi, Ff; Wagner, J; Walenz, B; Wood, Jmd; Zimin, Av; Bourque, G; Chaisson, Mjp; Flicek, P; Phillippy, Am; Zook, Jm; Eichler, Ee; Haussler, D; Wang, T; Jarvis, Ed; Miga, Kh; Garrison, E; Marschall, T; Hall, Im; Li, H; Paten, B | |
| A novel quantitative trait locus implicates Msh3 in the propensity for genome-wide short tandem repeat expansions in mice | 1-gen-2023 | O Maksimov, Mikhail; Wu, Cynthia; G Ashbrook, David; Villani, Flavia; Colonna, Vincenza; Mousavi, Nima; Ma, Nichole; Lu, Lu; K Pritchard, Jonathan; Goren, Alon; W Williams, Robert; A Palmer, Abraham; Gymrek, Melissa | |
| Increased mutation and gene conversion within human segmental duplications | 1-gen-2023 | Vollger, Mr; Dishuck, Pc; Harvey, Wt; Dewitt, Ws; Guitart, X; Goldberg, Me; Rozanski, An; Lucas, J; Asri, M; Abel, Hj; Antonaccifulton, Ll; Baid, G; Baker, Ca; Belyaeva, A; Billis, K; Bourque, G; Buonaiuto, S; Carroll, A; Chaisson, Mjp; Chang, Pc; Chang, Xh; Cheng, H; Chu, J; Cody, S; Colonna, V; Cook, De; Cookdeegan, Rm; Cornejo, Oe; Diekhans, M; Doerr, D; Ebert, P; Ebler, J; Eizenga, Jm; Fairley, S; Fedrigo, O; Felsenfeld, Al; Feng, X; Fischer, C; Flicek, P; Formenti, G; Frankish, A; Fulton, Rs; Gao, Y; Garg, S; Garrison, E; Garrison, Na; Giron, Cg; Green, Re; Groza, C; Guarracino, A; Haggerty, L; Hall, Im; Haukness, M; Haussler, D; Heumos, S; Hickey, G; Hourlier, T; Howe, K; Jain, M; Jarvis, Ed; Ji, Hp; Kenny, Ee; Koenig, Ba; Kolesnikov, A; Korbel, Jo; Kordosky, J; Koren, S; Lee, Hj; Li, H; Liao, Ww; Lu, S; Lu, Ty; Lucas, Jk; Magalhaes, H; Marcosola, S; Marijon, P; Markello, C; Marschall, T; Martin, Fj; Mccartney, A; Mcdaniel, J; Miga, Kh; Mitchell, Mw; Monlong, J; Mountcastle, J; Mwaniki, Mn; Nattestad, M; Novak, Am; Nurk, S; Olsen, He; Olson, Nd; Paten, B; Pesout, T; Phillippy, Am; Popejoy, Ab; Prins, P; Puiu, D; Rautiainen, M; Regier, Aa; Rhie, A; Sacco, S; Sanders, Ad; Schneider, Va; Schultz, Bi; Shafin, K; Sibbesen, Ja; Siren, J; Smith, Mw; Sofia, Hj; Abou Tayoun, An; Thibaudnissen, F; Tomlinson, C; Tricomi, Ff; Villani, F; Vollger, Mr; Wagner, J; Walenz, B; Wang, T; Wood, Jmd; Zimin, Av; Zook, Jm; Munson, Km; Lewis, Ap; Hoekzema, K; Logsdon, Ga; Porubsky, D; Paten, B; Harris, K; Hsieh, Ph; Eichler, Ee | |
| Pangenome graph construction from genome alignments with Minigraph-Cactus | 1-gen-2023 | Hickey, G; Monlong, J; Ebler, J; Novak, Am; Eizenga, Jm; Gao, Y; Abel, Hj; Antonaccifulton, Ll; Asri, M; Baid, G; Baker, Ca; Belyaeva, A; Billis, K; Bourque, G; Buonaiuto, S; Carroll, A; Chaisson, Mjp; Chang, Pc; Chang, Xh; Cheng, H; Chu, J; Cody, S; Colonna, V; Cook, De; Cookdeegan, Rm; Cornejo, Oe; Diekhans, M; Doerr, D; Ebert, P; Ebler, J; Eichler, Ee; Fairley, S; Fedrigo, O; Felsenfeld, Al; Feng, X; Fischer, C; Flicek, P; Formenti, G; Frankish, A; Fulton, Rs; Garg, S; Garrison, E; Garrison, Na; Giron, Cg; Green, Re; Groza, C; Guarracino, A; Haggerty, L; Hall, Im; Harvey, Wt; Haukness, M; Haussler, D; Heumos, S; Hoekzema, K; Hourlier, T; Howe, K; Jain, M; Jarvis, Ed; Ji, Hp; Kenny, Ee; Koenig, Ba; Kolesnikov, A; Korbel, Jo; Kordosky, J; Koren, S; Lee, Hj; Lewis, Ap; Liao, Ww; Lu, S; Lu, Ty; Lucas, Jk; Magalhaes, H; Marcosola, S; Marijon, P; Markello, C; Marschall, T; Martin, Fj; Mccartney, A; Mcdaniel, J; Miga, Kh; Mitchell, Mw; Mountcastle, J; Munson, Km; Mwaniki, Mn; Nattestad, M; Nurk, S; Olsen, He; Olson, Nd; Pesout, T; Phillippy, Am; Popejoy, Ab; Porubsky, D; Prins, P; Puiu, D; Rautiainen, M; Regier, Aa; Rhie, A; Sacco, S; Sanders, Ad; Schneider, Va; Schultz, Bi; Shafin, K; Sibbesen, Ja; Siren, J; Smith, Mw; Sofia, Hj; Tayoun, Ana; Thibaudnissen, F; Tomlinson, C; Tricomi, Ff; Villani, F; Vollger, Mr; Wagner, J; Walenz, B; Wang, T; Wood, Jmd; Zimin, Av; Zook, Jm; Marschall, T; Li, H; Paten, B | |
| Recombination between heterologous human acrocentric chromosomes | 1-gen-2023 | Guarracino, A; Buonaiuto, S; de Lima, Lg; Potapova, T; Rhie, A; Koren, S; Rubinstein, B; Fischer, C; Abel, Hj; Antonaccifulton, Ll; Asri, M; Baid, G; Baker, Ca; Belyaeva, A; Billis, K; Bourque, G; Carroll, A; Chaisson, Mjp; Chang, Pc; Chang, Xh; Cheng, H; Chu, J; Cody, S; Cook, De; Cookdeegan, Rm; Cornejo, Oe; Diekhans, M; Doerr, D; Ebert, P; Ebler, J; Eichler, Ee; Eizenga, Jm; Fairley, S; Fedrigo, O; Felsenfeld, Al; Feng, X; Flicek, P; Formenti, G; Frankish, A; Fulton, Rs; Gao, Y; Garg, S; Garrison, Na; Giron, Cg; Green, Re; Groza, C; Haggerty, L; Hall, I; Harvey, Wt; Haukness, M; Haussler, D; Heumos, S; Hickey, G; Hoekzema, K; Hourlier, T; Howe, K; Jain, M; Jarvis, Ed; Ji, Hp; Kenny, Ee; Koenig, Ba; Kolesnikov, A; Korbel, Jo; Kordosky, J; Lee, Hj; Lewis, Ap; Li, H; Liao, Ww; Lu, S; Lu, Ty; Lucas, Jk; Magalhaes, H; Marcosola, S; Marijon, P; Markello, C; Marschall, T; Martin, Fj; Mccartney, A; Mcdaniel, J; Miga, Kh; Mitchell, Mw; Monlong, J; Mountcastle, J; Munson, Km; Mwaniki, Mn; Nattestad, M; Novak, Am; Nurk, S; Olsen, He; Olson, Nd; Paten, B; Pesout, T; Popejoy, Ab; Porubsky, D; Prins, P; Puiu, D; Rautiainen, M; Regier, Aa; Sacco, S; Sanders, Ad; Schneider, Va; Schultz, Bi; Shafin, K; Sibbesen, Ja; Siren, J; Smith, Mw; Sofia, Hj; Tayoun, Ana; Thibaudnissen, F; Tomlinson, C; Tricomi, Ff; Villani, F; Vollger, Mr; Wagner, J; Walenz, B; Wang, T; Wood, Jmd; Zimin, Av; Zook, Jm; Gerton, Jl; Phillippy, Am; Colonna, V; Garrison, E | |
| LAMC2 marks a tumor-initiating cell population with an aggressive signature in pancreatic cancer | 1-gen-2022 | DELLE CAVE, Donatella; Buonaiuto, Silvia; Sainz Jr, Bruno; Fantuz, Marco; Mangini, Maria; Carrer, Alessandro; Di Domenico, Annalisa; Teresa Iavazzo, Tea; Andolfi, Gennaro; Cortina, Carme; Sevillano, Marta; Heeschen, Christopher; Colonna, Vincenza; Corona, Marco; Cucciardi, Antonio; Di Guida, Martina; Batlle, Eduard; DE LUCA, ANNA CHIARA; Lonardo, Enza | |
| Prioritization of putatively detrimental variants in euploid miscarriages | 1-gen-2022 | Buonaiuto, Silvia; Di Biase, Immacolata; Aleotti, Valentina; Ravaei, Amin; De Marino, Adriano; Damaggio, Gianluca; Chierici, Marco; Pulijala, Madhuri; D'Ambrosio, Palmira; Esposito, Gabriella; Ayub, Qasim; Furlanello, Cesare; Greco, Pantaleo; Capalbo, Antonio; Rubini, Michele; Di Biase, Sebastiano; Colonna, Vincenza | |
| A global analysis of conservative and non-conservative mutations in SARS-CoV-2 detected in the first year of the COVID-19 world-wide diffusion | 1-gen-2021 | Balasco, Nicole; Damaggio, Gianluca; Esposito, Luciana; Villani, Flavia; Berisio, Rita; Colonna, Vincenza; Vitagliano, Luigi | |
| Efficient dynamic variation graphs | 1-gen-2021 | M Eizenga, Jordan; M Novak, Adam; Kobayashi, Emily; Villani, Flavia; Cisar, Cecilia; Heumos, Simon; Hickey, Glenn; Colonna, Vincenza; Paten, Benedict; Garrison, Erik | |
| Genetic instability and anti-HPV immune response as drivers of infertility associated with HPV infection | 1-gen-2021 | Isaguliants M.; Krasnyak S.; Smirnova O.; Colonna V.; Apolikhin O.; Buonaguro F.M. | |
| Efficient dynamic variation graphs | 1-gen-2020 | Eizenga, Jm; Novak, Am; Kobayashi, E; Villani, F; Cisar, C; Heumos, S; Hickey, G; Colonna, V; Paten, B; Garrison, E | |
| Maternal exome analysis for the diagnosis of oocyte maturation defects and early embryonic developmental arrest | 1-gen-2020 | Capalbo, A; Buonaiuto, S; Figliuzzi, M; Damaggio, G; Girardi, L; Caroselli, S; Polim, ; Patassini, C; Cetinkaya, M; Yuksel, B; Azad, A; Grøndahl, Ml; Hoffmann, Er; Simónc, ; Colonna, V; Kahraman, S | |
| Genomic diversity and novel genome-wide association with fruit morphology in Capsicum, from 746k polymorphic sites | 1-gen-2019 | Colonna, Vincenza; D'Agostino, Nunzio; Garrison, Erik; Albrechtsen, Anders; Meisner, Jonas; Facchiano, Angelo; Cardi, Teodoro; Tripodi, Pasquale | |
| Identification of sex determination genes and their evolution in Phlebotominae sand flies (Diptera, Nematocera) | 1-gen-2019 | Petrella, V; Aceto, S; Colonna, V; Saccone, G; Sanges, R; Polanska, N; Volf, P; Gradoni, L; Bongiorno, G; Salvemini, M | |
| Inter-individual genomic heterogeneity within European population isolates | 1-gen-2019 | Anagnostou, P; Dominici, V; Battaggia, C; Lisi, A; Sarno, S; Boattini, A; Calo, C; Francalacci, P; Vona, G; Tofanelli, S; Vilar, Mg; Colonna, V; Pagani, L; Bisol, Gd | |
| Positive selection in Europeans and East-Asians at the ABCA12 gene | 1-gen-2019 | Sirica, R; Buonaiuto, M; Petrella, V; Sticco, L; Tramontano, D; Antonini, D; Missero, C; Guardiola, O; Andolfi, G; Kumar, H; Ayub, Q; Xue, Y; Tylersmith, C; Salvemini, M; D'Angelo, G; Colonna, V |