We discuss features of the effect of solvent on protein folding and aggregation, highlighting the physics related to the particulate nature and the peculiar structure of the aqueous solvent, and the biological significance of interactions between solvent and proteins. To this purpose we use a generalized energy landscape of extended dimensionality. A closer look at the properties of solvent induced interactions and forces proves useful for understanding the physical grounds of 'ad hoc' interactions and for devising realistic ways of accounting for solvent effects. The solvent has long been known to be a crucially important part of biological systems, and times appear mature for it to be adequately accounted for in the protein folding problem. Use of the extended dimensionality energy landscape helps eliciting the possibility of coupling among conformational changes and aggregation, such as proved by experimental data in the literature.

The role of solvent in protein folding and aggregation

M Manno;
2001

Abstract

We discuss features of the effect of solvent on protein folding and aggregation, highlighting the physics related to the particulate nature and the peculiar structure of the aqueous solvent, and the biological significance of interactions between solvent and proteins. To this purpose we use a generalized energy landscape of extended dimensionality. A closer look at the properties of solvent induced interactions and forces proves useful for understanding the physical grounds of 'ad hoc' interactions and for devising realistic ways of accounting for solvent effects. The solvent has long been known to be a crucially important part of biological systems, and times appear mature for it to be adequately accounted for in the protein folding problem. Use of the extended dimensionality energy landscape helps eliciting the possibility of coupling among conformational changes and aggregation, such as proved by experimental data in the literature.
2001
Istituto di Biofisica - IBF
Computational modeling
Energy landscapes
Hydration
Hydrophobic interactions
Protein aggregation
Protein conformational changes
Protein folding
Protein-solvent interactions
Spinodal and coexistence
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Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/20.500.14243/217604
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