The identification of sequence patterns involved in gene regulation and expression is a major challenge in molecular biology. In this paper we describe a novel algorithm and the software for searching nucleotide and protein sequences for complex nucleotide patterns including potential secondary structure Elements, also allowing for mismatches/mispairings below a user fixed

PatSearch: a pattern matcher software that finds functional elements in nucleotide and protein sequences and assesses their statistical significance

Liuni S;
2000

Abstract

The identification of sequence patterns involved in gene regulation and expression is a major challenge in molecular biology. In this paper we describe a novel algorithm and the software for searching nucleotide and protein sequences for complex nucleotide patterns including potential secondary structure Elements, also allowing for mismatches/mispairings below a user fixed
2000
Istituto di Tecnologie Biomediche - ITB
Pattern Searching
Bioinformatics
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Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/20.500.14243/234300
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