Mass spectrometry is a set of technologies with many applications in characterizing biological samples. Due to the huge quantity of data, often biased and contaminated by different source of errors, and the amount of results that is possible to extract, an easy-to-learn and complete workflow is essential. GeenaR is a robust web tool for pre-processing, analysing, visualizing and comparing a set of MALDI-ToF mass spectra. It combines PHP, Perl and R languages and allows different levels of control over the parameters, in order to adapt the work to the needs and expertise of the users.

GeenaR: a flexible approach to pre-process, analyse and compare MALDI-ToF mass spectra

E Del Prete;A Facchiano;C Angelini;
2016

Abstract

Mass spectrometry is a set of technologies with many applications in characterizing biological samples. Due to the huge quantity of data, often biased and contaminated by different source of errors, and the amount of results that is possible to extract, an easy-to-learn and complete workflow is essential. GeenaR is a robust web tool for pre-processing, analysing, visualizing and comparing a set of MALDI-ToF mass spectra. It combines PHP, Perl and R languages and allows different levels of control over the parameters, in order to adapt the work to the needs and expertise of the users.
2016
Istituto Applicazioni del Calcolo ''Mauro Picone''
Istituto di Scienze dell'Alimentazione - ISA
978-88-941906-0-1
Mass Spectrometry
Proteomics
Statistical Analysis
Web tool
File in questo prodotto:
Non ci sono file associati a questo prodotto.

I documenti in IRIS sono protetti da copyright e tutti i diritti sono riservati, salvo diversa indicazione.

Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/20.500.14243/319927
Citazioni
  • ???jsp.display-item.citation.pmc??? ND
  • Scopus ND
  • ???jsp.display-item.citation.isi??? ND
social impact