Virus taxonomy emerged as a discipline in the middle of the twentieth century. Traditionally, classification by virus taxonomistshas been focussed on the grouping of relatively closely related viruses. However, during the past few years, the InternationalCommittee on Taxonomy of Viruses (ICTV) has recognized that the taxonomy it develops can be usefully extended to includethe basal evolutionary relationships among distantly related viruses. Consequently, the ICTV has changed its Code to allowa 15-rank classification hierarchy that closely aligns with the Linnaean taxonomic system and may accommodate the entirespectrum of genetic divergence in the virosphere. The current taxonomies of three human pathogens, Ebola virus, severe acuterespiratory syndrome coronavirus and herpes simplex virus 1 are used to illustrate the impact of the expanded rank structure.This new rank hierarchy of virus taxonomy will stimulate further research on virus origins and evolution, and vice versa, andcould promote crosstalk with the taxonomies of cellular organisms.

The new scope of virus taxonomy: partitioning the virosphere into 15 hierarchical ranks

Rubino L;
2020

Abstract

Virus taxonomy emerged as a discipline in the middle of the twentieth century. Traditionally, classification by virus taxonomistshas been focussed on the grouping of relatively closely related viruses. However, during the past few years, the InternationalCommittee on Taxonomy of Viruses (ICTV) has recognized that the taxonomy it develops can be usefully extended to includethe basal evolutionary relationships among distantly related viruses. Consequently, the ICTV has changed its Code to allowa 15-rank classification hierarchy that closely aligns with the Linnaean taxonomic system and may accommodate the entirespectrum of genetic divergence in the virosphere. The current taxonomies of three human pathogens, Ebola virus, severe acuterespiratory syndrome coronavirus and herpes simplex virus 1 are used to illustrate the impact of the expanded rank structure.This new rank hierarchy of virus taxonomy will stimulate further research on virus origins and evolution, and vice versa, andcould promote crosstalk with the taxonomies of cellular organisms.
2020
Istituto per la Protezione Sostenibile delle Piante - IPSP - Sede Secondaria Bari
Comparative genomics
virus evolution
metagenomics
macroevolution
network analyses
phylogenetics
phylogenomics
taxonomy
virus
virosphere
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Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/20.500.14243/403259
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