The conformational landscape of the prenylchalcone plicatin B and some of its tautomers has been investigated at the B3LYP/6-31G* level in analogy to prior studies of ours on two structurally related prenylated pterocarpans. Since the antioxidant activity of these natural compounds is supposed to be related to their copper chelation ability, several complexes with Cu(I) and Cu(II) metal cations, Cu+ and Cu2+, have been taken into account with the metal ions described by effective core potentials in the LANL2DZ valence basis set. The preferred binding sites on low-energy conformers of E and Z plicatin B have been determined and their metal ion affinity (MIA) values have been compared. Both cations give stable complexes with plicatin B, but the stability order of the metalated species at the various coordination sites strongly depends on the cation nature. In particular, for the E configuration the most stable Cu+-plicatin B ground-state structure features the metal cation bridged between the hydroxy O lone pairs and the prenyl À density, while in the most stable Cu2+ complex the cation is coordinated with the inner lone pairs of the oxygens in the methyl ester moiety bearing an anti methyl group. For the Z configuration, in contrast, the most stable Cu2+ complexes are found with the metal ions dentated between the Z ester side chain and the prenyl pi-density, while Cu+ in addition is close to the aromatic ring density as well. Comparison of the Cu+ and Cu2+ affinity values demonstrates however that the affinity to Cu2+ is decidedly much higher (by a factor of 3-4, depending on the arrangement type) than that to Cu+, even including the possible B3LYP overestimate of the Cu2+ binding energy with respect to BHLYP. A tentative evaluation of MIA in aqueous solution using the polarizable continuum model of the solvent shows a remarkable decrease for Cu(II).

Plicatin B Conformational Landscape and Affinity to Copper (I and II) Metal Cations. A DFT Study

Alagona G;Ghio C
2009

Abstract

The conformational landscape of the prenylchalcone plicatin B and some of its tautomers has been investigated at the B3LYP/6-31G* level in analogy to prior studies of ours on two structurally related prenylated pterocarpans. Since the antioxidant activity of these natural compounds is supposed to be related to their copper chelation ability, several complexes with Cu(I) and Cu(II) metal cations, Cu+ and Cu2+, have been taken into account with the metal ions described by effective core potentials in the LANL2DZ valence basis set. The preferred binding sites on low-energy conformers of E and Z plicatin B have been determined and their metal ion affinity (MIA) values have been compared. Both cations give stable complexes with plicatin B, but the stability order of the metalated species at the various coordination sites strongly depends on the cation nature. In particular, for the E configuration the most stable Cu+-plicatin B ground-state structure features the metal cation bridged between the hydroxy O lone pairs and the prenyl À density, while in the most stable Cu2+ complex the cation is coordinated with the inner lone pairs of the oxygens in the methyl ester moiety bearing an anti methyl group. For the Z configuration, in contrast, the most stable Cu2+ complexes are found with the metal ions dentated between the Z ester side chain and the prenyl pi-density, while Cu+ in addition is close to the aromatic ring density as well. Comparison of the Cu+ and Cu2+ affinity values demonstrates however that the affinity to Cu2+ is decidedly much higher (by a factor of 3-4, depending on the arrangement type) than that to Cu+, even including the possible B3LYP overestimate of the Cu2+ binding energy with respect to BHLYP. A tentative evaluation of MIA in aqueous solution using the polarizable continuum model of the solvent shows a remarkable decrease for Cu(II).
2009
Istituto per i Processi Chimico-Fisici - IPCF
11
776
790
B3LYP/6-31G*
LanL2DZ
1:1 complexes
IEF-PCM continuum solvation
Metal ion affinity
The aqueous solvation in the IEF-PCM continuum solvent framework (UA0 radii) hardly affects structure and stability for selected complexes with rare exceptions, but dampens free energy differences. Structures with the cation most exposed to the solvent benefit from a large solvent effect that however is not sufficient to reverse the stability order in the cases here considered. In solution the MIA for the plicatin B complexes with Cu+ in part increases and in part decreases. In contrast, the MIA turns out to be significantly reduced when the plicatin B…Cu2+ complexes are embedded in aqueous solution for the competition between the strong solvent reaction field and the ligand. Cu(I) and (II) are more favourably coordinated by the Z structures than by the E ones, because the ±,²-unsaturated ester side chain bent toward À-density-rich regions attains the possibility to give polydentate structures and saturate several valences of the two cations. Since plicatin B can be considered as an enol, calculations on the keto tautomers of Z configuration have been carried out as well. The MIA turns out to be similar to that of the enol forms, whereas the complex stability is in general lower. The presence and stability of caged structures in some of the plicatin B (Z forms) complexes with Cu2+ explain the efficacy of this natural compound as an antioxidant agent, due to its transition metal ion sequestering properties.
2
info:eu-repo/semantics/article
262
Alagona G.; Ghio C.
01 Contributo su Rivista::01.01 Articolo in rivista
none
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Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/20.500.14243/50655
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