Species Distribution Models (SDMs) are used to explore and predict species-environment relationships across spatial and temporal scales. However, traditional SDMs often assume a single latent spatial structure throughout the study domain, limiting their ability to capture the complex environmental heterogeneity that governs ecological systems. In this study, we propose a novel composite modelling framework, the Frankenstein SDM, which integrates multiple spatio-temporal configurations within a single model. Built upon the INLA-SPDE Bayesian hierarchical approach, the Frankenstein SDM enables region-specific spatio-temporal structures to represent varying ecological processes across heterogeneous space. We evaluated our framework with two simulations: one with two sub-regions having distinct spatio-temporal dynamics and region-specific covariate effects, and another with four sub-regions with diverse spatio-temporal dependencies representing complex scenarios. We evaluated the model using a simulated dataset representing two regions with intentionally distinct spatio-temporal dynamics. Model performance was assessed via the Watanabe-Akaike Information Criterion, and the Root Mean Square Error derived from cross-validation. The Frankenstein SDM outperformed all standard configurations that rely on a single latent spatial structure across heterogeneous data. Real-world data were applied from fishery-independent surveys in the Strait of Sicily, modelling the standardized density of young-of-the-year European hake (Merluccius merluccius). The Frankenstein SDM improved model performance, capturing the contrasting spatio-temporal dynamics and region-specific covariate influences between two ecologically distinct sectors. Our results suggest that composite spatio-temporal models like Frankenstein SDM are essential when ecological processes vary across space, providing a more realistic and management-relevant tool. Our findings highlight that explicitly incorporating environmental heterogeneity into SDMs enhances predictive accuracy and ecological interpretability and advocates a shift from traditional “one-size-fits-all” SDMs toward modular spatial modelling frameworks.

The Frankenstein species distribution modelling: A composite Bayesian framework accounting for spatio-temporal heterogeneity in ecologically diverse regions

Matteo Barbato
Primo
;
Salvatore Gancitano;Germana Garofalo
2026

Abstract

Species Distribution Models (SDMs) are used to explore and predict species-environment relationships across spatial and temporal scales. However, traditional SDMs often assume a single latent spatial structure throughout the study domain, limiting their ability to capture the complex environmental heterogeneity that governs ecological systems. In this study, we propose a novel composite modelling framework, the Frankenstein SDM, which integrates multiple spatio-temporal configurations within a single model. Built upon the INLA-SPDE Bayesian hierarchical approach, the Frankenstein SDM enables region-specific spatio-temporal structures to represent varying ecological processes across heterogeneous space. We evaluated our framework with two simulations: one with two sub-regions having distinct spatio-temporal dynamics and region-specific covariate effects, and another with four sub-regions with diverse spatio-temporal dependencies representing complex scenarios. We evaluated the model using a simulated dataset representing two regions with intentionally distinct spatio-temporal dynamics. Model performance was assessed via the Watanabe-Akaike Information Criterion, and the Root Mean Square Error derived from cross-validation. The Frankenstein SDM outperformed all standard configurations that rely on a single latent spatial structure across heterogeneous data. Real-world data were applied from fishery-independent surveys in the Strait of Sicily, modelling the standardized density of young-of-the-year European hake (Merluccius merluccius). The Frankenstein SDM improved model performance, capturing the contrasting spatio-temporal dynamics and region-specific covariate influences between two ecologically distinct sectors. Our results suggest that composite spatio-temporal models like Frankenstein SDM are essential when ecological processes vary across space, providing a more realistic and management-relevant tool. Our findings highlight that explicitly incorporating environmental heterogeneity into SDMs enhances predictive accuracy and ecological interpretability and advocates a shift from traditional “one-size-fits-all” SDMs toward modular spatial modelling frameworks.
2026
Istituto per le Risorse Biologiche e le Biotecnologie Marine - IRBIM - Sede Secondaria Mazara del Vallo
Environmental Heterogeneity, Spatio-temporal Modelling, INLA-SPDE, Bayesian Hierarchical Models, Biodiversity Conservation, Fisheries Management; European Hake
File in questo prodotto:
File Dimensione Formato  
1-s2.0-S1574954126000877-main(2).pdf

accesso aperto

Tipologia: Documento in Post-print
Licenza: Creative commons
Dimensione 2.74 MB
Formato Adobe PDF
2.74 MB Adobe PDF Visualizza/Apri

I documenti in IRIS sono protetti da copyright e tutti i diritti sono riservati, salvo diversa indicazione.

Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/20.500.14243/576004
Citazioni
  • ???jsp.display-item.citation.pmc??? ND
  • Scopus ND
  • ???jsp.display-item.citation.isi??? ND
social impact