Brain modeling has emerged as a fundamental tool for understanding neural mechanisms and information processing across different spatial and temporal scales. However, the simulation and visualization of realistic full-scale neural models remain a challenge. To address this, we developed the Neural Circuit Visualizer (NCV), a web-based platform for the flexible simulation and visualization of full-scale point-neuron circuits. We integrated state-of-the-art scientific advances, such as region-specific connectivity and the anatomical reconstruction of the mouse right hippocampal CA1 region, with resources and services from mature research infrastructures (e.g., Hippocampome.org, ebrains.eu, ebrains-italy.eu) and high-performance computing (HPC) facilities. The resulting online tool provides a public resource for the simulation and visualization of neural dynamics in full-scale point-neuron models and fosters the comprehension of neural mechanisms under physiological and pathological conditions. The tool is released as open source to encourage further collaborative development and integration.

Visualization and simulation of full-scale point-neuron circuits via the Neural Circuit Visualizer web platform

Ali, Maqsood
Primo
;
Smiriglia, Roberto
Secondo
;
Spera, Emiliano;Migliore, Michele;Bologna, Luca L.
Ultimo
2026

Abstract

Brain modeling has emerged as a fundamental tool for understanding neural mechanisms and information processing across different spatial and temporal scales. However, the simulation and visualization of realistic full-scale neural models remain a challenge. To address this, we developed the Neural Circuit Visualizer (NCV), a web-based platform for the flexible simulation and visualization of full-scale point-neuron circuits. We integrated state-of-the-art scientific advances, such as region-specific connectivity and the anatomical reconstruction of the mouse right hippocampal CA1 region, with resources and services from mature research infrastructures (e.g., Hippocampome.org, ebrains.eu, ebrains-italy.eu) and high-performance computing (HPC) facilities. The resulting online tool provides a public resource for the simulation and visualization of neural dynamics in full-scale point-neuron models and fosters the comprehension of neural mechanisms under physiological and pathological conditions. The tool is released as open source to encourage further collaborative development and integration.
2026
Istituto di Biofisica - IBF - Sede Secondaria Palermo
large scale neural models, visualization, simulation, hippocampus
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Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/20.500.14243/582061
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