The PLUMED consortium unifies developers and contributors to PLUMED, an open-source library for enhanced-sampling, free-energy calculations and the analysis of molecular dynamics simulations. Here, we outline our efforts to promote transparency and reproducibility by disseminating protocols for enhanced-sampling molecular simulations.

Promoting transparency and reproducibility in enhanced molecular simulations

Toni Giorgino;
2019

Abstract

The PLUMED consortium unifies developers and contributors to PLUMED, an open-source library for enhanced-sampling, free-energy calculations and the analysis of molecular dynamics simulations. Here, we outline our efforts to promote transparency and reproducibility by disseminating protocols for enhanced-sampling molecular simulations.
2019
Istituto di Biofisica - IBF
Istituto Officina dei Materiali - IOM -
Inglese
16
8
670
https://www.nature.com/articles/s41592-019-0506-8
Sì, ma tipo non specificato
reproducibility
simulation
74
info:eu-repo/semantics/article
262
Bonomi, Massimiliano; Bussi, Giovanni; Camilloni, Carlo; A Tribello, Gareth; Baná, Pavel; Barducci, Alessandro; Bernetti, Mattia; G Bolhuis, Peter; Bo...espandi
01 Contributo su Rivista::01.01 Articolo in rivista
none
File in questo prodotto:
Non ci sono file associati a questo prodotto.

I documenti in IRIS sono protetti da copyright e tutti i diritti sono riservati, salvo diversa indicazione.

Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/20.500.14243/386878
Citazioni
  • ???jsp.display-item.citation.pmc??? ND
  • Scopus 933
  • ???jsp.display-item.citation.isi??? 931
social impact