Deep learning neural networks are capable to extract significant features from raw data, and to use these features for classification tasks. In this work we present a deep learning neural network for DNA sequence classification based on spectral sequence representation. The framework is tested on a dataset of 3000 16S genes and compared to the GRNN that we tested outperform the Support Vector Machine classification algorithm.

A deep learning approach to DNA sequence classification: first results

Riccardo Rizzo;Antonino Fiannaca;Massimo La Rosa;Alfonso Urso
2015

Abstract

Deep learning neural networks are capable to extract significant features from raw data, and to use these features for classification tasks. In this work we present a deep learning neural network for DNA sequence classification based on spectral sequence representation. The framework is tested on a dataset of 3000 16S genes and compared to the GRNN that we tested outperform the Support Vector Machine classification algorithm.
2015
Istituto di Calcolo e Reti ad Alte Prestazioni - ICAR
9788890643798
Convolutional Network
Deep Learning
Artificial Neural Network
Spectral Sequence Representation
K-mers representation
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Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/20.500.14243/302587
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