We exploit Surface-Enhanced Raman Scattering (SERS) to investigate aqueous droplets of genomic DNA deposited onto silver-coated silicon nanowires, and we show that it is possible to efficiently discriminate between spectra of tumoral and healthy cells. To assess the robustness of the proposed technique, we develop two different statistical approaches, one based on the Principal Components Analysis of spectral data and one based on the computation of the `2 distance between spectra. Both methods prove to be highly efficient, and we test their accuracy via the Cohen's ? statis- tics. We show that the synergistic combination of the SERS spectroscopy and the statistical analysis methods leads to efficient and fast cancer diagnostic applications allowing rapid and unexpansive discrimination between healthy and tumoral genomic DNA alternative to the more complex and expensive DNA sequencing

Statistical Classification for Raman Spectra of Tumoral Genomic DNA

M Ledda;A Sciortino;A Lisi;A Convertino;V Mussi
2022

Abstract

We exploit Surface-Enhanced Raman Scattering (SERS) to investigate aqueous droplets of genomic DNA deposited onto silver-coated silicon nanowires, and we show that it is possible to efficiently discriminate between spectra of tumoral and healthy cells. To assess the robustness of the proposed technique, we develop two different statistical approaches, one based on the Principal Components Analysis of spectral data and one based on the computation of the `2 distance between spectra. Both methods prove to be highly efficient, and we test their accuracy via the Cohen's ? statis- tics. We show that the synergistic combination of the SERS spectroscopy and the statistical analysis methods leads to efficient and fast cancer diagnostic applications allowing rapid and unexpansive discrimination between healthy and tumoral genomic DNA alternative to the more complex and expensive DNA sequencing
2022
Istituto per la Microelettronica e Microsistemi - IMM
FARMACOLOGIA TRASLAZIONALE - IFT
tumoral genomic DNA; Raman spectroscopy; classification; principal component analysis; logistic regression; minimum distance classifiers
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Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/20.500.14243/419855
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