Summary: ITSoneWB (ITSone WorkBench) is a Galaxy-based bioinformatic environment where comprehensive and high-quality reference data are connected with established pipelines and new tools in an automated and easy-to-use service targeted at global taxonomic analysis of eukaryotic communities based on Internal Transcribed Spacer 1 var- iants high-throughput sequencing.Availability and implementation: ITSoneWB has been deployed on the INFN-Bari ReCaS cloud facility and is freely available on the web at http://itsonewb.cloud.ba.infn.it/galaxy.Contact: m.santamaria@ibiom.cnr.itSupplementary information: Supplementary data are available at Bioinformatics online.
ITSoneWB: profiling global taxonomic diversity of eukaryotic communities on Galaxy
Marco A TangaroPrimo
;Bruno Fosso;Vito Flavio Licciulli;Giorgio Grillo;Graziano Pesole;Monica Santamaria
Ultimo
2021
Abstract
Summary: ITSoneWB (ITSone WorkBench) is a Galaxy-based bioinformatic environment where comprehensive and high-quality reference data are connected with established pipelines and new tools in an automated and easy-to-use service targeted at global taxonomic analysis of eukaryotic communities based on Internal Transcribed Spacer 1 var- iants high-throughput sequencing.Availability and implementation: ITSoneWB has been deployed on the INFN-Bari ReCaS cloud facility and is freely available on the web at http://itsonewb.cloud.ba.infn.it/galaxy.Contact: m.santamaria@ibiom.cnr.itSupplementary information: Supplementary data are available at Bioinformatics online.| File | Dimensione | Formato | |
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